Stem Rust

Objective 8: Discovering New Sources of Rust Resistance in Wild Wheat and Wild Barley

Ug99 and its derivatives possess virulence combinations that are capable of overcoming most of the 50+ major stem rust resistance genes available in wheat, including those most commonly used in major varieties throughout the world. Of the few major genes that remain effective against Ug99 in wheat, most were introduced from related species by inter-specific hybridizations. For durum wheat, an estimated 70% of CIMMYT and ICARDA, and 50% of North American advanced lines and varieties are susceptible to Ug99. Additional virulences specific to durum wheat are found in Ethiopia, rendering that crop’s vulnerability to stem rust even higher. Stem rust resistance in cultivated barley is very limited in general. Thus, identifying new sources of resistance to Ug99 is a top priority. Most of the phenotyping of wheat (common and durum) and barley conducted to date has focused on advanced breeding lines, varieties, and special genetic stocks carrying known genes. This Objective expands the search for resistance into the wealth of genetic diversity in wild relatives preserved in gene banks. Work to initiate or expand efforts to introgress resistance genes discovered in diploid wild relatives will also be initiated or expanded.

Because the majority of Ug99-effective major genes are derived from relatives of common and durum wheat, it is logical to extend the search for new resistances to those gene pools. Preliminary experiments at the Cereal Disease Laboratory have shown that resistance to Ug99 in Aegilops speltoides, Triticum timopheevi and Ae. sharonensis is common and that many accessions exhibited near-immune reactions. Resistance to Ug99 also was observed in Hordeum vulgare subsp. spontaneum. Identifying resistance in close relatives of these crop species will likely produce novel genes. The goal of this Objective is to discover new sources of resistance to Ug99 in wild relatives of common wheat, durum wheat, and barley. This will be accomplished by targeted, systematic phenotyping of wild relative accessions held in the gene banks.

This Objective will therefore include seedling assay phenotyping of gene bank accessions of several wild relatives of wheat, including Triticum monococcum, T. dicoccoides, T. dicoccum, T. carthlicum, T. polonicum, T. timopheevii, Aegilops speltoides, Ae. sharonensis, and Ae. tauschii. Accessions of wild relatives of barley, including Hordeum vulgare subsp. spontaneum and H. bulbosum will also be subjected to seedling tests. Initial screening of wild relatives will be done with Ug99. Resistant accessions will be tested for seedling reaction to other races as the first step in establishing the uniqueness of any major gene resistances. Work to transfer (introgress) putatively new resistance genes from the wild diploids will be initiated or expanded. Adult-plant screening of wild tetraploid species from ICARDA’s gene bank will also be conducted using the Critical Facility site in Ethiopia.

Outputs (deliverables) of this Objective will be the discovery of accessions of wild relatives of wheat and barley carrying putatively novel resistance genes and of wheat and barley lines carrying the newly discovered genes (from diploid species). All data will be registered with the originating gene bank and made available on the Project Website. The identity and nature of accessions exhibiting resistance will be pro-actively disseminated to the research community.

Objective 8: Discovering New Sources of Rust Resistance in Wild Wheat and Wild Barley
Activities Outputs Outcomes
(Short- and Long-Term)
Activity 8.1 Screening wild relatives of wheat and durum at the seedling stage with race Ug99 The presence and prevalence of Ug99 resistance in the targeted species, as well as specific accessions, of wild relatives of wheat and durum are known Specific accessions of wild relatives are served as the targets for introgressing novel resistance genes into wheat and durum. Stem rust resistance gene pools of wheat and durum are enriched.
Activity 8.2 Screening wild relatives of barley at the seedling stage with Ug99 The presence and prevalence of Ug99 resistance in the targeted species of wild relatives of barley are known Specific accessions of wild relatives are served as the targets for introgressing novel resistance genes into barley. Stem rust resistance gene pool of barley is enriched
Activity 8.3 Screening of ICARDA collection of wild tetraploids under field conditions for adult plant resistance to Ug99 at Debre Zeit, Ethiopia Tetraploid wild relatives of wheat identified with novel sources adult plant resistance to Ug99; results posted to project website; resistant selections available to global community Useful accessions of tetraploid wild relatives of wheat with adult plant resistance to Ug99 identified for use in bread and durum wheat breeding. Knowledge and availability of resistance germplasm pool enhanced
Activity 8.4 Introgressing resistance from T. timopheevii and Ae. speltoides to wheat Genetic stocks homozygous for Ug99 resistance are produced from >20 accessions of wild wheat relatives.   Potentially new sources of resistance for use in breeding and germplasm enhancement. Diversity of wheat stem rust resistance is enriched.
Activity 8.5 Introgressing resistance from Ae. sharonensis to wheat Genes conferring resistance to Ug99 in Aegilops sharonensis are introgressed into genetically stable and agronomically advanced lines of wheat Stable introgression of Ug99 resistance is completed in agronomically advanced lines of wheat. Resistance to Ug99 in wheat is broadened, resulting in stable production without the need for fungicide applications.
Activity 8.6 Introgressing resistance from wild barley and landraces to barley Genes conferring resistance to Ug99 in wild barley are introgressed into agronomically advanced breeding lines Stable introgression of Ug99 resistance is completed in agronomically advanced lines of barley. Resistance to Ug99 in barley is broadened, resulting in stable production without the need for fungicide applications.